Improving Safety of Lentiviral Gene Transfer
- 8.5 Years 2011/2020
- 715.026€ Total Award
Lentiviral vector (LV)-mediated gene transfer has an excellent therapeutic potential as demonstrated in pre-clinical studies and recent clinical trials. We previously demonstrated that advanced-generation Self-inactivating (SIN) LVs are associated to a lower genotoxic risk when compared to the conventionally used retroviral vectors. However, LV integration into the genome could still affect the function of cellular genes found at or near the insertion site, with deleterious consequences. Thus, a deeper evaluation of their residual genotoxicity is required. In the first aim of this project, we will stringently and comparatively assess the potential toxicity of different SIN LVs using sensitive in vivo assays. With these assays we will test if addition of insulator elements within SIN LV can reduce vector genotoxicity induced by enhancer-mediated activation. As second aim, we will address the impact of LV integrations on the splicing of the targeted genes and we will improve vector design to reduce its splicing interfering potential. Finally, by high throughput monitoring of the LV integrations in preclinical and clinical samples over the time, we will gain functional insights into the safety of SINLV.
Scientific Publications
- 2013 NATURE METHODS
Lentiviral vector-based insertional mutagenesis identifies genes associated with liver cancer
- 2012 JOURNAL OF CLINICAL INVESTIGATION
Whole transcriptome characterization of aberrant splicing events induced by lentiviral vector integrations
- 2013 MOLECULAR CANCER RESEARCH
Cancer Gene Discovery: Exploiting Insertional Mutagenesis
- 2012 METHODS IN ENZYMOLOGY
GENOTOXICITY ASSAY FOR GENE THERAPY VECTORS IN TUMOR PRONE CDKN2A(-/-) MICE
- 2014 GENOME MED
VISPA: a computational pipeline for the identification and analysis of genomic vector integration sites
- 2014 MOLECULAR THERAPY
Lentiviral Vector-based Insertional Mutagenesis Identifies Genes Involved in the Resistance to Targeted Anticancer Therapies
- 2017 NATURE COMMUNICATIONS
HIV-1-mediated insertional activation of STAT5B and BACH2 trigger viral reservoir in T regulatory cells
- 2015 BMC BIOINFORMATICS
adLIMS: a customized open source software that allows bridging clinical and basic molecular research studies
- 2014 MOLECULAR THERAPY
Uncovering and Dissecting the Genotoxicity of Self-inactivating Lentiviral Vectors In Vivo
- 2013 SCIENCE
Lentiviral hematopoietic stem cell gene therapy in patients with Wiskott-Aldrich syndrome
- 2013 BMC BIOINFORMATICS
SNPranker 2.0: a gene-centric data mining tool for diseases associated SNP prioritization in GWAS
- 2013 MOLECULAR THERAPY
The Fetal Mouse Is a Sensitive Genotoxicity Model That Exposes Lentiviral-associated Mutagenesis Resulting in Liver Oncogenesis
- 2011 Blood
Quest for safety at AAValon